sphinx error

Development matplotlib-devel
1

Just jumped into the new docs to take a look and immediately having problems building. I am hoping someone can make a quick fix so I don't have to debug.

quaternion:doc cmoad$ ./make.py html
Sphinx v0.3, building html
trying to load pickled env... not found
building [html]: targets for 45 source files that are out of date
updating environment: 45 added, 0 changed, 0 removed
reading... api/artist_api Exception occurred:
   File "/Users/cmoad/workspace/matplotlib/doc/sphinxext/inheritance_diagram.py", line 78, in _import_class_or_module
     "Invalid class '%s' specified for inheritance diagram" % name)
ValueError: Invalid class 'matplotlib.patches' specified for inheritance diagram

Thanks,
  Charlie

2

What version of Python are you running? All I can think from looking at the code is that something in the regex is behaving differently for you than me (on Python 2.5).

If you just want the docs to build (minus the inheritance diagrams), you can put a "return " at the top of "inheritance_diagram_directive_run" in inheritance_diagram.py

Cheers,
Mike

Charles Moad wrote:

···

Just jumped into the new docs to take a look and immediately having problems building. I am hoping someone can make a quick fix so I don't have to debug.

quaternion:doc cmoad$ ./make.py html
Sphinx v0.3, building html
trying to load pickled env... not found
building [html]: targets for 45 source files that are out of date
updating environment: 45 added, 0 changed, 0 removed
reading... api/artist_api Exception occurred:
   File "/Users/cmoad/workspace/matplotlib/doc/sphinxext/ inheritance_diagram.py", line 78, in _import_class_or_module
     "Invalid class '%s' specified for inheritance diagram" % name)
ValueError: Invalid class 'matplotlib.patches' specified for inheritance diagram

Thanks,
  Charlie

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3

Python2.5 on OSX.5

···

On Thu, Jun 19, 2008 at 11:14 PM, Michael Droettboom <mdroe@…31…> wrote:

What version of Python are you running? All I can think from looking at the code is that something in the regex is behaving differently for you than me (on Python 2.5).

If you just want the docs to build (minus the inheritance diagrams), you can put a “return ” at the top of “inheritance_diagram_directive_run” in inheritance_diagram.py

Cheers,

Mike

Charles Moad wrote:

Just jumped into the new docs to take a look and immediately having problems building. I am hoping someone can make a quick fix so I don’t have to debug.

quaternion:doc cmoad$ ./make.py html

Sphinx v0.3, building html

trying to load pickled env… not found

building [html]: targets for 45 source files that are out of date

updating environment: 45 added, 0 changed, 0 removed

reading… api/artist_api Exception occurred:

File “/Users/cmoad/workspace/matplotlib/doc/sphinxext/ inheritance_diagram.py”, line 78, in _import_class_or_module

 "Invalid class '%s' specified for inheritance diagram" % name)

ValueError: Invalid class ‘matplotlib.patches’ specified for inheritance diagram

Thanks,

    Charlie

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4

Have you updated Sphinx from SVN lately? I have r64374.

Sphinx should have dumped a full traceback into a tmp file (and told you where it is, which I don't see in your log output). Can you send that?

Cheers,
Mike

Charlie Moad wrote:

···

Python2.5 on OSX.5

On Thu, Jun 19, 2008 at 11:14 PM, Michael Droettboom <mdroe@...31... > <mailto:mdroe@…31…>> wrote:

    What version of Python are you running? All I can think from
    looking at the code is that something in the regex is behaving
    differently for you than me (on Python 2.5).

    If you just want the docs to build (minus the inheritance
    diagrams), you can put a "return " at the top of
    "inheritance_diagram_directive_run" in inheritance_diagram.py

    Cheers,
    Mike

    Charles Moad wrote:

        Just jumped into the new docs to take a look and immediately
        having problems building. I am hoping someone can make a
        quick fix so I don't have to debug.

        quaternion:doc cmoad$ ./make.py html
        Sphinx v0.3, building html
        trying to load pickled env... not found
        building [html]: targets for 45 source files that are out of date
        updating environment: 45 added, 0 changed, 0 removed
        reading... api/artist_api Exception occurred:
          File "/Users/cmoad/workspace/matplotlib/doc/sphinxext/
        inheritance_diagram.py", line 78, in _import_class_or_module
            "Invalid class '%s' specified for inheritance diagram" % name)
        ValueError: Invalid class 'matplotlib.patches' specified for
         inheritance diagram

        Thanks,
               Charlie

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5

Here’s that file.

Thanks,

Charlie

sphinx-err-zgO1PG.log (6 KB)

···

On Fri, Jun 20, 2008 at 9:25 AM, Michael Droettboom <mdroe@…31…> wrote:

Have you updated Sphinx from SVN lately? I have r64374.

Sphinx should have dumped a full traceback into a tmp file (and told you where it is, which I don’t see in your log output). Can you send that?

Cheers,

Mike

Charlie Moad wrote:

Python2.5 on OSX.5

On Thu, Jun 19, 2008 at 11:14 PM, Michael Droettboom <mdroe@…31… mailto:mdroe@...31...> wrote:

What version of Python are you running?  All I can think from

looking at the code is that something in the regex is behaving

differently for you than me (on Python 2.5).



If you just want the docs to build (minus the inheritance

diagrams), you can put a "return []" at the top of

"inheritance_diagram_directive_run" in inheritance_diagram.py



Cheers,

Mike



Charles Moad wrote:



    Just jumped into the new docs to take a look and immediately

    having  problems building.  I am hoping someone can make a

    quick fix so I  don't have to debug.



    quaternion:doc cmoad$ ./make.py html

    Sphinx v0.3, building html

    trying to load pickled env... not found

    building [html]: targets for 45 source files that are out of date

    updating environment: 45 added, 0 changed, 0 removed

    reading... api/artist_api Exception occurred:

      File "/Users/cmoad/workspace/matplotlib/doc/sphinxext/

    inheritance_diagram.py", line 78, in _import_class_or_module

        "Invalid class '%s' specified for inheritance diagram" % name)

    ValueError: Invalid class 'matplotlib.patches' specified for

     inheritance diagram



    Thanks,

           Charlie



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Space Telescope Science Institute

Operated by AURA for NASA

6

Sorry, I'm stumped.

Mike

Charlie Moad wrote:

···

Here's that file.

Thanks,
     Charlie

On Fri, Jun 20, 2008 at 9:25 AM, Michael Droettboom <mdroe@...31... > <mailto:mdroe@…31…>> wrote:

    Have you updated Sphinx from SVN lately? I have r64374.

    Sphinx should have dumped a full traceback into a tmp file (and
    told you where it is, which I don't see in your log output). Can
    you send that?

    Cheers,
    Mike

    Charlie Moad wrote:

        Python2.5 on OSX.5

        On Thu, Jun 19, 2008 at 11:14 PM, Michael Droettboom > <mdroe@...31... <mailto:mdroe@…31…> > <mailto:mdroe@…31…>> wrote:

           What version of Python are you running? All I can think from
           looking at the code is that something in the regex is behaving
           differently for you than me (on Python 2.5).

           If you just want the docs to build (minus the inheritance
           diagrams), you can put a "return " at the top of
           "inheritance_diagram_directive_run" in inheritance_diagram.py

           Cheers,
           Mike

           Charles Moad wrote:

               Just jumped into the new docs to take a look and
        immediately
               having problems building. I am hoping someone can make a
               quick fix so I don't have to debug.

               quaternion:doc cmoad$ ./make.py html
               Sphinx v0.3, building html
               trying to load pickled env... not found
               building [html]: targets for 45 source files that are
        out of date
               updating environment: 45 added, 0 changed, 0 removed
               reading... api/artist_api Exception occurred:
                 File "/Users/cmoad/workspace/matplotlib/doc/sphinxext/
               inheritance_diagram.py", line 78, in
        _import_class_or_module
                   "Invalid class '%s' specified for inheritance
        diagram" % name)
               ValueError: Invalid class 'matplotlib.patches'
        specified for
                inheritance diagram

               Thanks,
                      Charlie

                      -------------------------------------------------------------------------
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7

I see this same error using python-2.5 on Kubuntu-8.04. I'm looking into it.

Darren

···

On Saturday 21 June 2008 17:11:05 Michael Droettboom wrote:

Sorry, I'm stumped.

Mike

Charlie Moad wrote:
> Here's that file.
>
> Thanks,
> Charlie
>
> On Fri, Jun 20, 2008 at 9:25 AM, Michael Droettboom <mdroe@...31... > > <mailto:mdroe@…31…>> wrote:
>
> Have you updated Sphinx from SVN lately? I have r64374.
>
> Sphinx should have dumped a full traceback into a tmp file (and
> told you where it is, which I don't see in your log output). Can
> you send that?
>
> Cheers,
> Mike
>
> Charlie Moad wrote:
>
> Python2.5 on OSX.5
>
> On Thu, Jun 19, 2008 at 11:14 PM, Michael Droettboom > > <mdroe@...31... <mailto:mdroe@…31…> > > <mailto:mdroe@…31…>> wrote:
>
> What version of Python are you running? All I can think from
> looking at the code is that something in the regex is behaving
> differently for you than me (on Python 2.5).
>
> If you just want the docs to build (minus the inheritance
> diagrams), you can put a "return " at the top of
> "inheritance_diagram_directive_run" in inheritance_diagram.py
>
> Cheers,
> Mike
>
> Charles Moad wrote:
>
> Just jumped into the new docs to take a look and
> immediately
> having problems building. I am hoping someone can make a
> quick fix so I don't have to debug.
>
> quaternion:doc cmoad$ ./make.py html
> Sphinx v0.3, building html
> trying to load pickled env... not found
> building [html]: targets for 45 source files that are
> out of date
> updating environment: 45 added, 0 changed, 0 removed
> reading... api/artist_api Exception occurred:
> File "/Users/cmoad/workspace/matplotlib/doc/sphinxext/
> inheritance_diagram.py", line 78, in
> _import_class_or_module
> "Invalid class '%s' specified for inheritance
> diagram" % name)
> ValueError: Invalid class 'matplotlib.patches'
> specified for
> inheritance diagram
>
> Thanks,
> Charlie
>
>
>
> -------------------------------------------------------------------------
> Check out the new SourceForge.net Marketplace.
> It's the best place to buy or sell services for
> just about anything Open Source.
> http://sourceforge.net/services/buy/index.php
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>
> matplotlib-devel List Signup and Options
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>
>
>
> --
> Michael Droettboom
> Science Software Branch
> Operations and Engineering Division
> Space Telescope Science Institute
> Operated by AURA for NASA

-------------------------------------------------------------------------
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8

I think I see whats going on. On my machine, py_sig_re.match(name).groups()
returns:

(u'matplotlib.', u'patches', None, None)

but inheritance_diagram.py is trying to unpack this length=4 result into a
length=3 tuple.

Here is the definition of py_sig_re from sphinx:

py_sig_re = re.compile(
    r'''^ ([\w.]*\.)? # class name(s)
          (\w+) \s* # thing name
          (?: \((.*)\) # optional arguments
          (\s* -> \s* .*)? )? $ # optional return annotation
          ''', re.VERBOSE)

···

On Saturday 21 June 2008 17:11:05 Michael Droettboom wrote:

Sorry, I'm stumped.

Mike

Charlie Moad wrote:
> Here's that file.
>
> Thanks,
> Charlie
>
> On Fri, Jun 20, 2008 at 9:25 AM, Michael Droettboom <mdroe@...31... > > <mailto:mdroe@…31…>> wrote:
>
> Have you updated Sphinx from SVN lately? I have r64374.
>
> Sphinx should have dumped a full traceback into a tmp file (and
> told you where it is, which I don't see in your log output). Can
> you send that?
>
> Cheers,
> Mike
>
> Charlie Moad wrote:
>
> Python2.5 on OSX.5
>
> On Thu, Jun 19, 2008 at 11:14 PM, Michael Droettboom > > <mdroe@...31... <mailto:mdroe@…31…> > > <mailto:mdroe@…31…>> wrote:
>
> What version of Python are you running? All I can think from
> looking at the code is that something in the regex is behaving
> differently for you than me (on Python 2.5).
>
> If you just want the docs to build (minus the inheritance
> diagrams), you can put a "return " at the top of
> "inheritance_diagram_directive_run" in inheritance_diagram.py
>
> Cheers,
> Mike
>
> Charles Moad wrote:
>
> Just jumped into the new docs to take a look and
> immediately
> having problems building. I am hoping someone can make a
> quick fix so I don't have to debug.
>
> quaternion:doc cmoad$ ./make.py html
> Sphinx v0.3, building html
> trying to load pickled env... not found
> building [html]: targets for 45 source files that are
> out of date
> updating environment: 45 added, 0 changed, 0 removed
> reading... api/artist_api Exception occurred:
> File "/Users/cmoad/workspace/matplotlib/doc/sphinxext/
> inheritance_diagram.py", line 78, in
> _import_class_or_module
> "Invalid class '%s' specified for inheritance
> diagram" % name)
> ValueError: Invalid class 'matplotlib.patches'
> specified for
> inheritance diagram
>
> Thanks,
> Charlie
>
>
>
> -------------------------------------------------------------------------
> Check out the new SourceForge.net Marketplace.
> It's the best place to buy or sell services for
> just about anything Open Source.
> http://sourceforge.net/services/buy/index.php
> _______________________________________________
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> Matplotlib-devel@lists.sourceforge.net
> <mailto:Matplotlib-devel@lists.sourceforge.net>
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> <mailto:Matplotlib-devel@lists.sourceforge.net>>
>
>
> matplotlib-devel List Signup and Options
>
>
>
>
> --
> Michael Droettboom
> Science Software Branch
> Operations and Engineering Division
> Space Telescope Science Institute
> Operated by AURA for NASA

-------------------------------------------------------------------------
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9

Ah. Something changed in Sphinx SVN. I think the best long term fix is to probably not "borrow" this regex from Sphinx, but include our own version in inheritance_diagram.py. I'll fix this.

Cheers,
Mike

Darren Dale wrote:

···

I think I see whats going on. On my machine, py_sig_re.match(name).groups() returns:

(u'matplotlib.', u'patches', None, None)

but inheritance_diagram.py is trying to unpack this length=4 result into a length=3 tuple.

Here is the definition of py_sig_re from sphinx:

py_sig_re = re.compile(
    r'''^ ([\w.]*\.)? # class name(s)
          (\w+) \s* # thing name
          (?: \((.*)\) # optional arguments
          (\s* -> \s* .*)? )? $ # optional return annotation
          ''', re.VERBOSE)

On Saturday 21 June 2008 17:11:05 Michael Droettboom wrote:
  

Sorry, I'm stumped.

Mike

Charlie Moad wrote:
    

Here's that file.

Thanks,
     Charlie

On Fri, Jun 20, 2008 at 9:25 AM, Michael Droettboom <mdroe@...31... >>> <mailto:mdroe@…31…>> wrote:

    Have you updated Sphinx from SVN lately? I have r64374.

    Sphinx should have dumped a full traceback into a tmp file (and
    told you where it is, which I don't see in your log output). Can
    you send that?

    Cheers,
    Mike

    Charlie Moad wrote:

        Python2.5 on OSX.5

        On Thu, Jun 19, 2008 at 11:14 PM, Michael Droettboom >>> <mdroe@...31... <mailto:mdroe@…31…> >>> <mailto:mdroe@…31…>> wrote:

           What version of Python are you running? All I can think from
           looking at the code is that something in the regex is behaving
           differently for you than me (on Python 2.5).

           If you just want the docs to build (minus the inheritance
           diagrams), you can put a "return " at the top of
           "inheritance_diagram_directive_run" in inheritance_diagram.py

           Cheers,
           Mike

           Charles Moad wrote:

               Just jumped into the new docs to take a look and
        immediately
               having problems building. I am hoping someone can make a
               quick fix so I don't have to debug.

               quaternion:doc cmoad$ ./make.py html
               Sphinx v0.3, building html
               trying to load pickled env... not found
               building [html]: targets for 45 source files that are
        out of date
               updating environment: 45 added, 0 changed, 0 removed
               reading... api/artist_api Exception occurred:
                 File "/Users/cmoad/workspace/matplotlib/doc/sphinxext/
               inheritance_diagram.py", line 78, in
        _import_class_or_module
                   "Invalid class '%s' specified for inheritance
        diagram" % name)
               ValueError: Invalid class 'matplotlib.patches'
        specified for
                inheritance diagram

               Thanks,
                      Charlie

        -------------------------------------------------------------------------
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    Space Telescope Science Institute
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Operations and Engineering Division
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Operated by AURA for NASA

10

Looks like sphinx==0.4 was just released. Could we agree to target this instead of svn?

  • Charlie
···

On Mon, Jun 23, 2008 at 11:18 AM, Michael Droettboom <mdroe@…31…> wrote:

Ah. Something changed in Sphinx SVN. I think the best long term fix is to probably not “borrow” this regex from Sphinx, but include our own version in inheritance_diagram.py. I’ll fix this.

Cheers,

Mike

Darren Dale wrote:

I think I see whats going on. On my machine, py_sig_re.match(name).groups() returns:

(u’matplotlib.‘, u’patches’, None, None)

but inheritance_diagram.py is trying to unpack this length=4 result into a length=3 tuple.

Here is the definition of py_sig_re from sphinx:

py_sig_re = re.compile(

r'''^ ([\w.]*\.)?            # class name(s)

      (\w+)  \s*             # thing name

      (?: \((.*)\)           # optional arguments

      (\s* -> \s* .*)? )? $  # optional return annotation

      ''', re.VERBOSE)

On Saturday 21 June 2008 17:11:05 Michael Droettboom wrote:

Sorry, I’m stumped.

Mike

Charlie Moad wrote:

Here’s that file.

Thanks,

 Charlie

On Fri, Jun 20, 2008 at 9:25 AM, Michael Droettboom <mdroe@…31… > > > > > > > > mailto:mdroe@...31...> wrote:

Have you updated Sphinx from SVN lately?  I have r64374.



Sphinx should have dumped a full traceback into a tmp file (and

told you where it is, which I don't see in your log output).  Can

you send that?



Cheers,

Mike



Charlie Moad wrote:



    Python2.5 on OSX.5



    On Thu, Jun 19, 2008 at 11:14 PM, Michael Droettboom > > > >  > > > >         <mdroe@...31... <mailto:mdroe@...31...> > > > >  > > > >         <mailto:mdroe@...31... <mailto:mdroe@...31...>>> wrote:



       What version of Python are you running?  All I can think from

       looking at the code is that something in the regex is behaving

       differently for you than me (on Python 2.5).



       If you just want the docs to build (minus the inheritance

       diagrams), you can put a "return []" at the top of

       "inheritance_diagram_directive_run" in inheritance_diagram.py



       Cheers,

       Mike



       Charles Moad wrote:



           Just jumped into the new docs to take a look and

    immediately

           having  problems building.  I am hoping someone can make a

           quick fix so I  don't have to debug.



           quaternion:doc cmoad$ ./make.py html

           Sphinx v0.3, building html

           trying to load pickled env... not found

           building [html]: targets for 45 source files that are

    out of date

           updating environment: 45 added, 0 changed, 0 removed

           reading... api/artist_api Exception occurred:

             File "/Users/cmoad/workspace/matplotlib/doc/sphinxext/

           inheritance_diagram.py", line 78, in

    _import_class_or_module

               "Invalid class '%s' specified for inheritance

    diagram" % name)

           ValueError: Invalid class 'matplotlib.patches'

    specified for

            inheritance diagram



           Thanks,

                  Charlie





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Michael Droettboom

Science Software Branch

Operations and Engineering Division

Space Telescope Science Institute

Operated by AURA for NASA

11

That version seems to work for me.

I agree it's nice to stick to a released version, and we can do that for now. However, we seem to be pretty good at requiring new features and bugfixes out of Sphinx so far, so I don't know, realistically, how long that will last. Sphinx doesn't feel quite at that level of maturity yet.

Cheers,
Mike

Charlie Moad wrote:

···

Looks like sphinx==0.4 was just released. Could we agree to target this instead of svn?

- Charlie

On Mon, Jun 23, 2008 at 11:18 AM, Michael Droettboom <mdroe@...31... > <mailto:mdroe@…31…>> wrote:

    Ah. Something changed in Sphinx SVN. I think the best long term
    fix is to probably not "borrow" this regex from Sphinx, but
    include our own version in inheritance_diagram.py. I'll fix this.

    Cheers,
    Mike

    Darren Dale wrote:

        I think I see whats going on. On my machine,
        py_sig_re.match(name).groups() returns:

        (u'matplotlib.', u'patches', None, None)

        but inheritance_diagram.py is trying to unpack this length=4
        result into a length=3 tuple.

        Here is the definition of py_sig_re from sphinx:

        py_sig_re = re.compile(
           r'''^ ([\w.]*\.)? # class name(s)
                 (\w+) \s* # thing name
                 (?: \((.*)\) # optional arguments
                 (\s* -> \s* .*)? )? $ # optional return annotation
                 ''', re.VERBOSE)

        On Saturday 21 June 2008 17:11:05 Michael Droettboom wrote:
         
            Sorry, I'm stumped.

            Mike

            Charlie Moad wrote:
               
                Here's that file.

                Thanks,
                    Charlie

                On Fri, Jun 20, 2008 at 9:25 AM, Michael Droettboom > <mdroe@...31... <mailto:mdroe@…31…> > <mailto:mdroe@…31…>> wrote:

                   Have you updated Sphinx from SVN lately? I have
                r64374.

                   Sphinx should have dumped a full traceback into a
                tmp file (and
                   told you where it is, which I don't see in your log
                output). Can
                   you send that?

                   Cheers,
                   Mike

                   Charlie Moad wrote:

                       Python2.5 on OSX.5

                       On Thu, Jun 19, 2008 at 11:14 PM, Michael
                Droettboom
                       <mdroe@...31... <mailto:mdroe@…31…>
                <mailto:mdroe@…31…>
                       <mailto:mdroe@…31…
                <mailto:mdroe@…31…> <mailto:mdroe@…31…
                <mailto:mdroe@…31…>>>> wrote:

                          What version of Python are you running? All
                I can think from
                          looking at the code is that something in the
                regex is behaving
                          differently for you than me (on Python 2.5).

                          If you just want the docs to build (minus
                the inheritance
                          diagrams), you can put a "return " at the
                top of
                          "inheritance_diagram_directive_run" in
                inheritance_diagram.py

                          Cheers,
                          Mike

                          Charles Moad wrote:

                              Just jumped into the new docs to take a
                look and
                       immediately
                              having problems building. I am hoping
                someone can make a
                              quick fix so I don't have to debug.

                              quaternion:doc cmoad$ ./make.py html
                              Sphinx v0.3, building html
                              trying to load pickled env... not found
                              building [html]: targets for 45 source
                files that are
                       out of date
                              updating environment: 45 added, 0
                changed, 0 removed
                              reading... api/artist_api Exception
                occurred:
                                File
                "/Users/cmoad/workspace/matplotlib/doc/sphinxext/
                              inheritance_diagram.py", line 78, in
                       _import_class_or_module
                                  "Invalid class '%s' specified for
                inheritance
                       diagram" % name)
                              ValueError: Invalid class
                'matplotlib.patches'
                       specified for
                               inheritance diagram

                              Thanks,
                                     Charlie

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                   --
                   Michael Droettboom
                   Science Software Branch
                   Operations and Engineering Division
                   Space Telescope Science Institute
                   Operated by AURA for NASA
                     
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    -- Michael Droettboom
    Science Software Branch
    Operations and Engineering Division
    Space Telescope Science Institute
    Operated by AURA for NASA

--
Michael Droettboom
Science Software Branch
Operations and Engineering Division
Space Telescope Science Institute
Operated by AURA for NASA