Multiplot with one colorbar

Hello all,

I make multi plot with colorbars. I need help, how do make only one colorbar for six panels? I also want to show only lowest x-axis. I copy my recent code and figure here.

   # Open file
fd = nc.Dataset(fname, 'r')
# Read variables beam = fd.variables['beam'][:]
rng = fd.variables['range'][:]
tim = fd.variables['time'][:]
pwr = fd.variables['pwr'][:]
nfft = fd.variables['nfft'][0]
pn = fd.variables['pnoise'][:]
width=fd.variables['width'][:]
# Close netCDF file
fd.close()
# Specify beam
ibeam = ibeams[i]
# Time convertion tim = tim/3600.0
#Plot
p_plot = pwr[ibeam]
for it in range(len(tim)):
p_plot[it] = p_plot[it] - pn[ibeam][it] - 10.*np.log10(nfft)
p_plot = p_plot.transpose() #Specify subplot
pl.subplot(611 + i)
#Contour plot
v= np.linspace(5., 50., 5., endpoint=True)
x= pl.contourf(tim, rng, p_plot, v, cmap=pl.cm.jet) x = pl.colorbar(ticks=v)
x.ax.set_title('dB')
print x # Set X and Y axis lower/uppser limit
set_xy = range(4)
set_xy[0] = 18.0 # x min
set_xy[1] = 30.0 # x max
set_xy[2] = 200.0 # y min
set_xy[3] = 550.0 # y max
pl.axis(set_xy)
# Set labels
pl.xlabel('time (hours)')
pl.ylabel('range (km)')
pl.show()

![figure_1.png|800x597](upload://wWlq61ikOrWueoiIXeOkxK6WsMn.png)
Thank you....

Hi,

.

Your example is not much clear. It’s better post some short example and a running piece of code.

btw, maybe your problem should be solved with this post:

http://stackoverflow.com/questions/13784201/matplotlib-2-subplots-1-colorbar

Cheers,

Arnaldo

figure_1.png

···

Instituto de Oceanografia - FURG


Arnaldo D’Amaral Pereira Granja Russo
Lab. de Estudos dos Oceanos e Clima

2015-03-06 6:36 GMT-03:00 Dyah rahayu martiningrum <dyahrm09@…287…>:

Hello all,

I make multi plot with colorbars. I need help, how do make only one colorbar for six panels? I also want to show only lowest x-axis. I copy my recent code and figure here.

   # Open file
fd = nc.Dataset(fname, 'r')
# Read variables beam = fd.variables['beam'][:]
rng = fd.variables['range'][:]
tim = fd.variables['time'][:]
pwr = fd.variables['pwr'][:]
nfft = fd.variables['nfft'][0]
pn = fd.variables['pnoise'][:]
width=fd.variables['width'][:]
# Close netCDF file
fd.close()
# Specify beam
ibeam = ibeams[i]
# Time convertion tim = tim/3600.0
#Plot
p_plot = pwr[ibeam]
for it in range(len(tim)):
p_plot[it] = p_plot[it] - pn[ibeam][it] - 10.*np.log10(nfft)
p_plot = p_plot.transpose() #Specify subplot
pl.subplot(611 + i)
#Contour plot
v= np.linspace(5., 50., 5., endpoint=True)
x= pl.contourf(tim, rng, p_plot, v, cmap=pl.cm.jet) x = pl.colorbar(ticks=v)
x.ax.set_title('dB')
print x # Set X and Y axis lower/uppser limit
set_xy = range(4)
set_xy[0] = 18.0 # x min
set_xy[1] = 30.0 # x max
set_xy[2] = 200.0 # y min
set_xy[3] = 550.0 # y max
pl.axis(set_xy)
# Set labels
pl.xlabel('time (hours)')
pl.ylabel('range (km)')
pl.show()


Thank you....


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An old example of something like this is here:

http://matplotlib.org/examples/pylab_examples/multi_image.html

Eric

···

On 2015/03/05 11:36 PM, Dyah rahayu martiningrum wrote:

Hello all,

I make multi plot with colorbars. I need help, how do make only one
colorbar for six panels? I also want to show only lowest x-axis. I copy
my recent code and figure here.

Hi,

I guess I don't understand the "[axx for axx in ax.flat]" command, but this steals from all the axes.

Cheers, Jody

fig,ax = plt.subplots(2,2)
for i in range(2):
    for j in range(2):
        im=ax[i,j].imshow(np.ones((20,20)))
        im.set_clim([-1.,2.])
cax,kw = mpl.colorbar.make_axes([axx for axx in ax.flat],shrink=0.5)
plt.colorbar(im, cax=cax, **kw)

···

On Mar 6, 2015, at 9:39 AM, Eric Firing <efiring@...202...> wrote:

On 2015/03/05 11:36 PM, Dyah rahayu martiningrum wrote:

Hello all,

I make multi plot with colorbars. I need help, how do make only one
colorbar for six panels? I also want to show only lowest x-axis. I copy
my recent code and figure here.

An old example of something like this is here:

http://matplotlib.org/examples/pylab_examples/multi_image.html

Eric

------------------------------------------------------------------------------
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Thank you so much Jody, Eric, Arnaldo, and Joy.
I will try your suggestion.

Dyah

···

On Sat, Mar 7, 2015 at 5:21 AM, Jody Klymak <jklymak@…4192…> wrote:

Hi,

I guess I don’t understand the “[axx for axx in ax.flat]” command, but this steals from all the axes.

Cheers, Jody

fig,ax = plt.subplots(2,2)

for i in range(2):

for j in range(2):

    im=ax[i,j].imshow(np.ones((20,20)))

    im.set_clim([-1.,2.])

cax,kw = mpl.colorbar.make_axes([axx for axx in ax.flat],shrink=0.5)

plt.colorbar(im, cax=cax, **kw)

On Mar 6, 2015, at 9:39 AM, Eric Firing <efiring@…202…> wrote:

On 2015/03/05 11:36 PM, Dyah rahayu martiningrum wrote:

Hello all,

I make multi plot with colorbars. I need help, how do make only one

colorbar for six panels? I also want to show only lowest x-axis. I copy

my recent code and figure here.

An old example of something like this is here:

http://matplotlib.org/examples/pylab_examples/multi_image.html

Eric


Dive into the World of Parallel Programming The Go Parallel Website, sponsored

by Intel and developed in partnership with Slashdot Media, is your hub for all

things parallel software development, from weekly thought leadership blogs to

news, videos, case studies, tutorials and more. Take a look and join the

conversation now. http://goparallel.sourceforge.net/


Matplotlib-users mailing list

Matplotlib-users@lists.sourceforge.net

https://lists.sourceforge.net/lists/listinfo/matplotlib-users


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by Intel and developed in partnership with Slashdot Media, is your hub for all

things parallel software development, from weekly thought leadership blogs to

news, videos, case studies, tutorials and more. Take a look and join the

conversation now. http://goparallel.sourceforge.net/


Matplotlib-users mailing list

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===============================================

Dyah R Martiningrum
Student at Department of Communications and Computer Engineering

Graduate School of Informatics, Kyoto University

RISH, Gokasho, Uji shi, Kyoto, 611-0011, Japan.

Office : +81 0774 38 3856

Mobile : +81 090 6676 1981

===============================================

Hi all,

Just to follow up, I wrote the following helper function to put a single colorbar to the right of a) an axes, b) a list of axes, c) to the right of a gridspec. I was getting a little peeved with colorbar not working as I liked with subplots or gridspec, and this kind of does the trick for me for most of my use cases.

I’m probably not the world’s best python programmer so feel free to make clearer.

Cheers, Jody

def colorbarRight(pcm,ax,fig,shrink=0.7,width=0.025,gap=0.03,**kwargs):

‘’’

def colorbarRight(pcm,ax,fig,shrink=0.7,width=0.05,gap=0.02)

Position colorbar to the right of axis ‘ax’ with colors from artist pcm.

ax can be an array of axes such as that returned by “subplots”.

ax can also be a GridSpec, in which case the colorbar is centered to the

right of the grid.

Defaults might no leave enough room for the colorbar on the right side, so

you should probably use subplots_adjust() or gridspec_update() to make more

space to the right:

with subplots:

import matplotlib.pyplot as plt

fig,ax=plt.subplots(2,2)

fig.subplots_adjust(right=0.87)

for axx in ax.flatten():

pcm=axx.pcolormesh(rand(10,10))

colorbarRight(pcm,ax,fig,extend=‘max’)

with gridspec:

import matplotlib.gridspec

import matplotlib.pyplot as plt

fig=plt.figure()

gs = gridspec.GridSpec(2,2)

gs.update(right=0.87)

for ii in range(2):

for jj in range(2):

ax=plt.subplot(gs[ii,jj])

pcm=ax.pcolormesh(rand(10,10))

colorbarRight(pcm,gs,fig,extend=‘max’)

‘’’

import numpy as np

if type(ax) is matplotlib.gridspec.GridSpec:

gridspecs are different than axes:

pos = ax.get_grid_positions(fig)

y0 = pos[0][-1]

y1 = pos[1][0]

x1 = pos[3][-1]

else:

if ~(type(ax) is np.ndarray):

these are supposedly axes:

ax=np.array(ax)

get max x1, min y0 and max y1

y1 = 0.

y0 = 1.

x1=0.

for axx in ax.flatten():

pos=axx.get_position()

x1=np.max([pos.x1,x1])

y1=np.max([pos.y1,y1])

y0=np.min([pos.y0,y0])

height = y1-y0

pos2 = [x1 + gap, y0 + (1.-shrink)height/2., width, heightshrink]

cax=axes(position=pos2)

fig.colorbar(pcm,cax=cax,**kwargs)

···

On Sat, Mar 7, 2015 at 5:21 AM, Jody Klymak <jklymak@…4192…> wrote:

Hi,

I guess I don’t understand the “[axx for axx in ax.flat]” command, but this steals from all the axes.

Cheers, Jody

fig,ax = plt.subplots(2,2)

for i in range(2):

for j in range(2):

    im=ax[i,j].imshow(np.ones((20,20)))

    im.set_clim([-1.,2.])

cax,kw = mpl.colorbar.make_axes([axx for axx in ax.flat],shrink=0.5)

plt.colorbar(im, cax=cax, **kw)

On Mar 6, 2015, at 9:39 AM, Eric Firing <efiring@…202…> wrote:

On 2015/03/05 11:36 PM, Dyah rahayu martiningrum wrote:

Hello all,

I make multi plot with colorbars. I need help, how do make only one

colorbar for six panels? I also want to show only lowest x-axis. I copy

my recent code and figure here.

An old example of something like this is here:

http://matplotlib.org/examples/pylab_examples/multi_image.html

Eric


Dive into the World of Parallel Programming The Go Parallel Website, sponsored

by Intel and developed in partnership with Slashdot Media, is your hub for all

things parallel software development, from weekly thought leadership blogs to

news, videos, case studies, tutorials and more. Take a look and join the

conversation now. http://goparallel.sourceforge.net/


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Matplotlib-users@lists.sourceforge.net

https://lists.sourceforge.net/lists/listinfo/matplotlib-users


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by Intel and developed in partnership with Slashdot Media, is your hub for all

things parallel software development, from weekly thought leadership blogs to

news, videos, case studies, tutorials and more. Take a look and join the

conversation now. http://goparallel.sourceforge.net/


Matplotlib-users mailing list

Matplotlib-users@lists.sourceforge.net

https://lists.sourceforge.net/lists/listinfo/matplotlib-users

===============================================

Dyah R Martiningrum
Student at Department of Communications and Computer Engineering

Graduate School of Informatics, Kyoto University

RISH, Gokasho, Uji shi, Kyoto, 611-0011, Japan.

Office : +81 0774 38 3856

Mobile : +81 090 6676 1981

===============================================