Okay, I think I've gotten all the major bugs out, and the code can be upgraded from 'major hack' to 'minor hack'. The files that were changed (as well as a directory patch) can be found at:
http://www.cns.nyu.edu/~abes/matplotlib/
This code currently only works/tested with GTK and with the pygtk2.2 section (although the 2.4 section is trivial to update). All the major changes were to the backend_bases.py file, so it should also be trivial to port it to the other backends as well (i.e. basically just a copy and paste).
All toolbar functionality is now handled in the plugin file 'toolbar.py' file using various children of 'toolbar_widget'. I had to change the syntax in the .matplotlibrc file somewhat to allow variable arguments to the widgets (e.g. the 'view_controller' doesn't need tooltips, or text, as it isn't visible) to:
toolbar.widget: <toolbar, home_button>: home, Home, Reset original view
where in, '<toolbar, home_button>:', toolbar is the module name, and home_button is the class. The rest are arguments (name, text, and tooltip in this case). There is a small issue with the fact that commas cannot be included in the tooltips.
I also fixed the plugins.py code so that it will now search multiple plugin paths, deliminated by ':'.
The files 'toolbar.py' and 'print.py' have to go into the plugins directory for this to work, and the other python files into their normal locations.
Except for changing the cursors (I didn't get around to writing that code), it appears to work exactly the same as the old version (helped tremendously of course by using mostly the same code).
Abe