Hello,
I want to use matplotlib to visualize my figures but no plot appears when I call matplotlib.pyplot. This is the script I’m running
python
import barnaba as bb
import matplotlib.pyplot as plt
top="trna.prmtop"
traj="trna.mdcrd"
native="trna.pdb"
ermsd=bb.ermsd(native,traj,topology=top
plt.plot(ermsd[::1])
plt.show()
I am using python within a virtual environment.
python version 3.8
linux
PS. I have tried to change the backend but to no avail. Does anyone have any suggestions?
Thanks